Changing to autopots mid flower. Will roots be okay?

Hello everyone,

I decided i want to use autopots to grow in. Currently in the middle of my first grow, plants are autoflowers and 6 weeks old.

I ran into issues with my arthritis by having to water and move the pots in a cramped space, especially now mid flower when they need watering every other day. The pots arrived today and i set it all up and put my textile pots into it after a final top watering.

Now afterwards i started to think about the roots and how they probably arent used to bottom watering. Will this cause problems? Or should i be fine?

If it could become a big issue i will continue to top water for this grow.

Anyone with a similar experience?