IGV viewer - how to see coding DNA location
Relatively new to IGV! I have case lung carcinoma with MET exon 14 skipping mutation. In IGV can clearly see chr7:116411888-116411903 deletion. This includes canonical splice site. But getting different coding DNA annotation on two runs, one called c.2942-15_2942del and other c.2945-12_2945del. In IGV can see the genomic location, MET exon site, MET amino acid locations. But can IGV show the coding DNA calls, for the given RefSeq? Thanks!
Posted Jun 23, 2025, 4:11 AM UTC
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