Hybrid Athlete training

I’m trying to begin taking calisthenics seriously and need a routine that will take into account my running routine, skill training, flexibility and mobility, any rehab or prehab, normal hypertrophy/ strength training, as well as including a leg day, all while not fatiguing my central nervous system. My first skills goals are High pull ups to my waist, and the 90 degree hold, and as for running I’m training for a sub 21 5k by april of next year (run a sub 25 right now). Can somebody help me to see how I would go about training like this