Do the scan ability damage boosts apply if you use it before an enemy turns hostile?

For example lets say I want to extract in the DZ but a non-hostile player appears about 20 seconds before the drop.

At this point I scan the area and the non-hostile player is scanned even though "no threats are detected". If he shoots me after I scan, will all my critical hit change and damage boosts apply for me and my team still (Assuming the player turns hostile during the regular scan period)?