Analysis Visor Markers; Massive Problem

So before 1.3, when you scanned a building with your analysis visor it would put a small point on it for you to go to. If you went there and used the AOE scanner it would go away. Well, that doesn't seem to be the case anymore, and I've got a couple dozen of these annoying white dots all over the place. Does anybody know if there's a way to get rid of them?